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Etiological spectrum and antimicrobial resistance of the most frequently isolated pathogens, associated with urinary tract infections in ambulatory patients

Victoria Snegarova-Toneva, Neli Ermenlieva, Denis Niyazi, Miroslava Miroshnikova, Stoyan Stoyanov, Temenuga Stoeva

Abstract

Introduction: Urinary tract infections (UTIs) are among the most common infections both in the community and in the hospital setting.

Aim: The aim of this study is to investigate the etiological spectrum and antimicrobial resistance of most frequently isolated pathogens, associated with UTIs in ambulatory patients in Varna city, Bulgaria during a seven-month period (October 2020–April 2021).

Materials and Methods: A total of 1600 urine samples, collected from patients with suspected UTIs were tested. Screening for bacterial growth was done by HM&L Uroquattro instrument (ALIFAX, Italy). Species identification and antimicrobial susceptibility testing were performed by VITEK 2 Compact System (bioMerieux) and Kirby-Bauer disk diffusion method.

Results: E. coli was the most commonly isolated uropathogen regardless of the age group (48%, n = 61), followed by Enterococcus faecalis (33%, n = 42) and other representatives of order Enterobacterales (13.3%, n = 18). The resistance rates in the group of Gram-negative isolates (n = 79) in decreasing order were as follows: ampicillin, 64.5% > trimethoprim/sulfamethoxazole, 36% > ciprofloxacin, 29.1% > amoxicillin-clavulanic acid, 27.8% > cefuroxime, levofloxacin, 21.5% > fosfomycin, 13.1% > ceftriaxone, 12.6% > ceftazidime, 10.1% > gentamicin, nitrofurantoin, 6.5% > nitroxoline, 4.9%. The resistance rates among the isolates of E. faecalis (n = 42) were as follows: ciprofloxacin, 28.6% > gentamicin, 23.8% > levofloxacin, 19% > nitrofurantoin, 4.7% > amoxicillin, 2.4%. No resistance to meropenem, amikacin, vancomycin, and teicoplanin was found in the studied collection of isolates (n = 127).

Conclusion: The etiological spectrum of UTIs in ambulatory patients was dominated by E. coli, followed by E. faecalis. In the group of Gram-negative uropathogens, high resistance rates to ampicillin, trimethoprim/sulfamethoxazole and quinolones were detected. Third-generation cephalosporins, fosfomycin, nitrofurantoin and nitroxoline retained very good activity. Among Enterococcus faecalis isolates, the second most commonly isolated bacterial species, a decreased activity of quinolones was found too, but the aminopenicillins and nitrofurantoin remain highly active.


Keywords

urinary tract infection; etiology; antimicrobial resistance

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DOI: http://dx.doi.org/10.14748/ssm.v54i2.8475
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About The Authors

Victoria Snegarova-Toneva
Medical University of Varna
Bulgaria

Department of Microbiology and Virusology, Faculty of Medicine;

Medical Diagnostic Laboratory Laborexpress 2000 Ltd, Varna

Neli Ermenlieva
Medical University of Varna
Bulgaria

Department of Microbiology and Virusology, Faculty of Medicine

Denis Niyazi
Medical University of Varna
Bulgaria

Department of Microbiology and Virusology, Faculty of Medicine;

Microbiology Laboratory, St. Marina University Hospital, Varna

Miroslava Miroshnikova
Medical University of Varna
Bulgaria

Student, Faculty of Medicine

Stoyan Stoyanov
Medical University of Varna
Bulgaria

Student, Faculty of Medicine

Temenuga Stoeva
Medical University of Varna
Bulgaria

Department of Microbiology and Virusology, Faculty of Medicine;

Microbiology Laboratory, St. Marina University Hospital, Varna

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